cpmancuso

Pinned Repositories

cacnes_biogeo
Language:MATLAB00
dpu
Data Processing Unit for eVOLVER
Language:HTML0 1 00
Sepidermidis-antagonism
Code and endpoint data files for "Intraspecies warfare restricts strain coexistence in human skin microbiomes"
Language:HTML01
WideVariant
Tutorial for running the Lieberman Lab's core pipelines, updates for Key-Lab Lieberman-Lab collaboration
Language:Python00
dpu
Data Processing Unit for eVOLVER
Language:HTML4 6 2119
evolver
Language:Python8 3 1817
WideVariant
Tutorial for running the Lieberman Lab's core pipelines, updates for Key-Lab Lieberman-Lab collaboration
Language:Python0 0 01
DDR-eVOLVER-model
Scripts used to execute DDR eVOLVER experiments and ecology simulations
Language:Jupyter Notebook1 5 00
evolver-analyze
MATLAB package for basic analysis of raw eVOLVER data files generated as in Wong et al 2018.
Language:MATLAB10
WideVariant
Precision evolutionary analysis of large intraspecies microbial data sets using a 2-step interactive pipeline
Language:Python2 3 15

cpmancuso's Repositories

cpmancuso/cacnes_biogeo
Language:MATLAB00
cpmancuso/dpu
Data Processing Unit for eVOLVER
Language:HTML0 1 00
cpmancuso/Sepidermidis-antagonism
Code and endpoint data files for "Intraspecies warfare restricts strain coexistence in human skin microbiomes"
Language:HTML01
cpmancuso/WideVariant
Tutorial for running the Lieberman Lab's core pipelines, updates for Key-Lab Lieberman-Lab collaboration
Language:Python00