/FreeSurfer_to_Stanford_Hardi_Label

This script alignes a given T1 weighted images to a Diffusion weighted images. The advantage of this way of alignment is, that the bvecs don't need to be reorientated as well. Additionally this script maps the FreeSurfer labels to the Stanford HARDI labels.

Primary LanguageJupyter Notebook

FreeSurfer_to_Stanford_Hardi_Label

This script alignes a given T1 weighted images to a Diffusion weighted images. The advantage of this way of alignment is, that the bvecs don't need to be reorientated as well. Additionally this script maps the FreeSurfer labels to the Stanford HARDI labels.