Pinned Repositories
bcpanel
High-level library for binary classification tasks. In one line, it is possible to call several machine learning methods performing cross-validation and feature selection. (Work In Progress)
creggian-python
Python module with utility functions. I mainly use it for pyspark
lazy.subset
R function to load in memory only subsets of large dataset using awt
mahout
Implementation of mRMR feature selection algorithm in MapReduce. Distributed as Java library for Mahout
notebook-pyspark-feature-selection
A collection of Jupyter notebooks to perform feature selection in Spark (python)
readInput
R function that converts input parameters (always strings) into the proper type of object
readParams
R pacakge to converts input parameters (always strings) into the proper type of object
slides
Collection of slides used for presentations, seminar or related
spark-ifs
Iterative Filter Based Feature Selection in high-dimensional dataset using MapReduce. Scala implementation for Apache Spark
ucsc-hg19-fasta
Script to download FASTA chromosome sequences from UCSC and combine them in one single FASTA file
creggian's Repositories
creggian/ucsc-hg19-fasta
Script to download FASTA chromosome sequences from UCSC and combine them in one single FASTA file
creggian/notebook-pyspark-feature-selection
A collection of Jupyter notebooks to perform feature selection in Spark (python)
creggian/bcpanel
High-level library for binary classification tasks. In one line, it is possible to call several machine learning methods performing cross-validation and feature selection. (Work In Progress)
creggian/creggian-python
Python module with utility functions. I mainly use it for pyspark
creggian/readParams
R pacakge to converts input parameters (always strings) into the proper type of object
creggian/slides
Collection of slides used for presentations, seminar or related
creggian/alignment-and-variant-calling-tutorial
basic walk-throughs for alignment and variant calling from NGS sequencing data
creggian/BigBio
creggian/CoNVaDING
Copy Number Variation Detection In Next-generation sequencing Gene panels was designed for small (single-exon) copy number variation (CNV) detection in high coverage next-generation sequencing (NGS) data
creggian/creggian.github.io
Use this template if you need a quick developer / data science portfolio! Based on a Minimal Jekyll theme for GitHub Pages.
creggian/dsa-repo-test-01-16
dsa-repo-test-01-16
creggian/ExPecto
creggian/fastq-trim-extra
creggian/flutter
Flutter makes it easy and fast to build beautiful mobile apps.
creggian/Git
This repository contains the course material for the Git course
creggian/hackyourfuture-git-branch
creggian/HYF-belgium-website
creggian/laravel-fashionshop
creggian/ngs-playground
Collection of small exercises to assess the behaviour of NGS tools in specific settings.
creggian/nlp-with-python
creggian/phd-thesis
Dissertation, data and scripts used in my PhD thesis
creggian/Pipeline-Standardization
creggian/profile
Read, Manipulate, and Write Profiler Data
creggian/python-chess
A pure Python chess library with move generation and validation, PGN parsing and writing, Polyglot opening book reading, Gaviota tablebase probing, Syzygy tablebase probing and UCI engine communication
creggian/qiaseq-smcounter-v2
creggian/RANN
R package providing fast nearest neighbour search (wraps ANN library)
creggian/RMariaDB
An R interface to MariaDB
creggian/RPostgres
A DBI-compliant interface to PostgreSQL
creggian/rsnippets
creggian/smcounter-v2-paper
Data and code supporting smCounter-v2-paper