crimBubble

@molbio-dresden

Pinned Repositories

ECCsplorer
The ECCsplorer is a bioinformatics pipeline for the automated detection of extrachromosomal circular DNA (eccDNA) from paired-end read data of amplified circular DNA.
Language:Python18 1 165
flexidot
Highly customizable, ambiguity-aware dotplots for visual sequence analyses
Language:Python1 0 00
repeats_and_circles_assembly
Workflows for the assembly of reapeats and circles from genome-skimming or eccDNA-Seq read data.
Language:Python3 1 00
Inpactor2
Inpactor2: LTR retrotransposon detector and classificator using Deep Learning
Language:Jupyter Notebook23 2 54

crimBubble/ECCsplorer
The ECCsplorer is a bioinformatics pipeline for the automated detection of extrachromosomal circular DNA (eccDNA) from paired-end read data of amplified circular DNA.
Language:Python18 1 165
crimBubble/repeats_and_circles_assembly
Workflows for the assembly of reapeats and circles from genome-skimming or eccDNA-Seq read data.
Language:Python3 1 00
crimBubble/flexidot
Highly customizable, ambiguity-aware dotplots for visual sequence analyses
Language:Python1 0 00