crwilliams11

Pinned Repositories

• ShinyCell

  Shiny Interactive Web Apps for Single-Cell Data

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• wiki

  SciWiki: Collective KnowledgeBase for Scientific Data and Use

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• CosMx-Analysis-Scratch-Space

  This repository is an exploratory resource to accelerate opensource analysis of CosMx® Spatial Molecular Imager (SMI) data. Contained here are and writeups and vignettes addressing a variety of topics discussed when analyzing single-cell spatial data.

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• InSituType

  An R package for performing cell typing in SMI and other single cell data

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• CellProfileLibrary

  2813

• FastReseg

  FastReseg for detection and correction of cell segmentation error based on spatial profile of transcripts.

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• InSituCor

  InSituCor An R package for discovering modules of spatially correlated genes in spatial transcriptomics data.

  Language:HTML20

crwilliams11's Repositories