Pinned Repositories
Allergy_clinical_trial
BioinformaticsPracticals1
Student resources for UE Bioinformatische Übungen I
Hands-on-Biomedical-Data
Practical exercises for the course "Hands-on Biomedical Data - Resources and Analysis Tools"
neuroblastoma
Single-cell transcriptomics and epigenomics unravel the role of monocytes in neuroblastoma bone marrow metastasis
pnet_robustness
Reliable interpretability of biology-inspired deep neural networks
SplineOmics
Timeseries analysis of -omics data can be carried out by fitting spline curves to the data and using limma for hypothesis testing. For this, the right spline freedom and further hyperparameters must be identified, and the obtained hits clustered based on the spline shape.The R package SplineOmics streamlines this whole process and generates reports
SplineOmics_html_reports
Stores the HTML reports that are the output of the functions of the SplineOmics package, so that they can be linked in the documentation of the actual SplineOmics package, without placing those big files there.
tfcf
Systematic functional screening of chromatin factors identifies strong lineage and disease dependencies in normal and malignant haematopoiesis.
Computational Systems Biology Group's Repositories
csbg/neuroblastoma
Single-cell transcriptomics and epigenomics unravel the role of monocytes in neuroblastoma bone marrow metastasis
csbg/tfcf
Systematic functional screening of chromatin factors identifies strong lineage and disease dependencies in normal and malignant haematopoiesis.
csbg/pnet_robustness
Reliable interpretability of biology-inspired deep neural networks
csbg/SplineOmics
Timeseries analysis of -omics data can be carried out by fitting spline curves to the data and using limma for hypothesis testing. For this, the right spline freedom and further hyperparameters must be identified, and the obtained hits clustered based on the spline shape.The R package SplineOmics streamlines this whole process and generates reports
csbg/Allergy_clinical_trial
csbg/BioinformaticsPracticals1
Student resources for UE Bioinformatische Übungen I
csbg/Hands-on-Biomedical-Data
Practical exercises for the course "Hands-on Biomedical Data - Resources and Analysis Tools"
csbg/SplineOmics_html_reports
Stores the HTML reports that are the output of the functions of the SplineOmics package, so that they can be linked in the documentation of the actual SplineOmics package, without placing those big files there.