Pinned Repositories
ae-norm
Autoencoder normalization of the DepMap
barseq_counter
A simple tool for demultiplexing barcode sequencing experiments.
BEAN-counter
BridGE-Python
BridGE: a pathway-based analysis tool for detecting genetic interactions from GWAS
C.albicans-ml-pipeline
Pipeline of building a machine learning model to identify C. albicans gene essentiality
CG-TARGET
CSBIO-Website
FLEX_R
FunctionaL Evaluation of eXperimental perturbation (i.e. genome wide knockout) screens
SGA_Public
Compute genetic interactions from SGA output of colony sizes in yeast.
VS-SVM
Improving Measures of Chemical Structural Similarity Using Machine Learning on Chemical-Genetic Interactions
Myers Lab's Repositories
csbio/barseq_counter
A simple tool for demultiplexing barcode sequencing experiments.
csbio/BridGE-Python
BridGE: a pathway-based analysis tool for detecting genetic interactions from GWAS
csbio/C.albicans-ml-pipeline
Pipeline of building a machine learning model to identify C. albicans gene essentiality
csbio/ae-norm
Autoencoder normalization of the DepMap
csbio/BEAN-counter
csbio/CG-TARGET
csbio/CSBIO-Website
csbio/SGA_Public
Compute genetic interactions from SGA output of colony sizes in yeast.
csbio/VS-SVM
Improving Measures of Chemical Structural Similarity Using Machine Learning on Chemical-Genetic Interactions
csbio/C.albicans_in_vitro_pipeline
Functional genomic analysis of genes important for Candida albicans fitness in diverse environmental conditions
csbio/camoco-cob-maize-demo
csbio/cluster_innerproduct
A patch for Cluster3.0 (1.50) to add a "raw inner product" similarity option
csbio/FLEX
Functional Evaluation of Experimental Perturbations
csbio/FLEX_R
FunctionaL Evaluation of eXperimental perturbation (i.e. genome wide knockout) screens
csbio/Mendalert
A cronable script which check to see if new papers were added to a mendaley group. Emails a list if new papers are available.
csbio/orthrus
csbio/BridGE
csbio/C.albicansDataHub
csbio/CamocoHelixInstall
csbio/prototroph_scoring
Supplemental Code