Requirements
Make sure you have a relatively recent version of node (v4.1.1 is known to work).
To build, do
npm run build
And for production (minifed, deduped)
npm run build-production
See package.json for more build options and scripts.
Example
makeSyntenyDotplots({
data_url: "my-server/11691.22557.ks", // path to a .ks file
element_id: "#myDiv", // id of the div you want the
// plots to be put in
genome_x: {
name: "Pan Troglodytes", // English name of the genome
// (for plot axes)
id: "11691", // ID number (usually some digits)
chromosomes: [
{
gene_count: 2319, // ignored for now
length: 115123233, // length of the chromosome
// in neucleotide space
name: "1"
}
]
},
genome_y: {
... // same as above
}
});