Pinned Repositories
AgoSVM
You know it, babe ;D
biolib
A little Python library of functions in Bioinformatics.
blobtools
Modular command-line solution for visualisation, quality control and taxonomic partitioning of genome datasets
book
BotBot
Cejote & Cschu's GreedBot
cs_pdbtools
A collection of code to process biomolecular data obtained from Protein Data Bank files.
gff_quantifier
ktoolu
kraken tools & utilities
milk
MILK: Machine Learning Toolkit
QSolanum
cschu's Repositories
cschu/gff_quantifier
cschu/eggnog-mapper
Fast genome-wide functional annotation through orthology assignment
cschu/vortex_knight
cschu/bioconda-recipes
Conda recipes for the bioconda channel.
cschu/biodb_id_mapper
cschu/cazymo
cschu/container-forge
cschu/duk_singularity
cschu/eggnog_annotation
cschu/eggnog_burst
cschu/gq_flow
cschu/gqlib
cschu/hisat2
Graph-based alignment (Hierarchical Graph FM index)
cschu/MAPseq
highthroughput rRNA sequence classification and OTU mapping for metagenomic samples
cschu/medi
Metagenomic Estimation of Dietary Intake and Content.
cschu/metaphlow
cschu/metatrec
cschu/mTAGs
cschu/nevermore
cschu/nevermore_lib
cschu/nf-batch-controller
cschu/phagcn_singularity
cschu/profile_me_ci
cschu/protoflow
cschu/quantispire
cschu/samestr
SameStr identifies shared strains between pairs of metagenomic samples based on the similarity of SNV profiles.
cschu/serpapi-gscraper
cschu/taxcheck
cschu/vknight-docker
cschu/vknight_lib