csieffert

Pinned Repositories

core-phylogenomics
Pipeline for identifying core SNPs and building a phylogenetic tree
Language:Perl4 6 104
vcf2pseudoalignment
Scripts for converting VCF files to an alignment of core SNPs.
Language:Perl0 5 45
core-phylogenomics
Pipeline for identifying core SNPs and building a phylogenetic tree
Language:Perl0 1 00
epi_tree
Phylogenetic tree visualization with metadata
Language:JavaScript0 1 10
Genomic_Epi_2017
Course contents for Infectious Disease Genomic Epidemiology 2017
Language:HTML0 1 00
vcf2pseudoalignment
Scripts for converting VCF files to an alignment of core SNPs.
Language:Perl00

csieffert's Repositories

csieffert/core-phylogenomics
Pipeline for identifying core SNPs and building a phylogenetic tree
Language:Perl0 1 00
csieffert/epi_tree
Phylogenetic tree visualization with metadata
Language:JavaScript0 1 10
csieffert/Genomic_Epi_2017
Course contents for Infectious Disease Genomic Epidemiology 2017
Language:HTML0 1 00
csieffert/vcf2pseudoalignment
Scripts for converting VCF files to an alignment of core SNPs.
Language:Perl00