Pinned Repositories
ACC_training_2018_Bern
AwesomeData
🙌 Smorgasbord of awesome data sets.
biomagdsb
This repository contains the codes to run the nuclei segmentation pipeline of the BIOMAG group inspired by Kaggle's Data Science Bowl 2018 competition
celligner
tumor - cancer cell line alignment. Use it on the depmap portal or install it with pip.
CellProfiler
An open-source application for biological image analysis
components
Piximi’s generic React components
cyto-graph
cytomining-hackathon-wiki
Cytomining Hackathon 2016
dcp_helper
Distributed Cell Profiler Helper Functions
drawer
Piximi’s Drawer component
csmolnar's Repositories
csmolnar/ACC_training_2018_Bern
csmolnar/biomagdsb
This repository contains the codes to run the nuclei segmentation pipeline of the BIOMAG group inspired by Kaggle's Data Science Bowl 2018 competition
csmolnar/celligner
tumor - cancer cell line alignment. Use it on the depmap portal or install it with pip.
csmolnar/CellProfiler
An open-source application for biological image analysis
csmolnar/components
Piximi’s generic React components
csmolnar/dcp_helper
Distributed Cell Profiler Helper Functions
csmolnar/drawer
Piximi’s Drawer component
csmolnar/hooks
Piximi’s generic React hooks
csmolnar/in-silico-labeling
Code for In silico labeling: Predicting fluorescent labels in unlabeled images
csmolnar/invasivegrowth
csmolnar/labelfree-cellpainting
Label-free Cell Painting
csmolnar/mlgoc_cellprofiler2_module
csmolnar/mlgoc_cellprofiler_module
csmolnar/models
Piximi’s TensorFlow.js models
csmolnar/MoNuSAC
This repository contains my implementations of the algorithms which MoNuSAC participants could use for data preparation to train their models at ISBI 2020.
csmolnar/navigation-drawer
Piximi’s NavigationDrawer component
csmolnar/NEUBIAS_2018_TS7_HCS
General workflow for high content screening
csmolnar/no-code-low-code
No Code Low Code Examples
csmolnar/piximi
a free, open-source web app for annotating, training, and evaluating image understanding algorithms
csmolnar/piximi-application
csmolnar/Python
All Algorithms implemented in Python
csmolnar/pytorch_fnet
Three dimensional cross-modal image inference
csmolnar/rapid
RApid Phenotyping of cancer Isolate Dependencies
csmolnar/scikit-learn
scikit-learn: machine learning in Python
csmolnar/scipy
Scipy library main repository
csmolnar/seq
A high-performance, Pythonic language for bioinformatics
csmolnar/store
Piximi’s Redux actions, reducers, and selectors
csmolnar/taxonpages
TaxonPages is a tool to serve TaxonPages.
csmolnar/translations
Piximi’s translations
csmolnar/types
Piximi’s generic type declarations