ctarn
谭永卿, Ph.D. student, mainly focus on mass spectrometry-based proteomics application development (using Julia).
Institute of Computing Technology, Chinese Academy of SciencesChina
Pinned Repositories
averagine.ctarn.io
Online utility to visualize isotope pattern of peptide based on averagine model.
ctarn.io
homepage
MgfRead.py
Utility to convert MGF files exported by msConvert or Bruker to the compatible format for pFind/pLink.
MiniApp.jl
PepFeat.jl
(merging into PepPre) PepFeat is used to detect peptide features from LC-MS map, and align peptide features of multiple runs (to measure retention time variation).
PepPre.jl
Promote peptide identification using accurate and comprehensive precursors. https://doi.org/10.1021/acs.jproteome.3c00293
ThermoRawRead.cs
ThermoRawRead is used to extract mass spectrometry data from RAW files of Thermo Fisher instruments.
Flux.jl
Relax! Flux is the ML library that doesn't make you tensor
julia
The Julia Programming Language
ctarn's Repositories
ctarn/PepPre.jl
Promote peptide identification using accurate and comprehensive precursors. https://doi.org/10.1021/acs.jproteome.3c00293
ctarn/averagine.ctarn.io
Online utility to visualize isotope pattern of peptide based on averagine model.
ctarn/ctarn.io
homepage
ctarn/MgfRead.py
Utility to convert MGF files exported by msConvert or Bruker to the compatible format for pFind/pLink.
ctarn/MiniApp.jl
ctarn/PepFeat.jl
(merging into PepPre) PepFeat is used to detect peptide features from LC-MS map, and align peptide features of multiple runs (to measure retention time variation).
ctarn/ThermoRawRead.cs
ThermoRawRead is used to extract mass spectrometry data from RAW files of Thermo Fisher instruments.