Pinned Repositories
treadmilling
This repository contains the Molecular Dynamics and Dynamic Monte Carlo implementations of the coarse-grained treadmilling filaments model presented in "Self-organisation of mortal filaments: the role of FtsZ treadmilling in bacterial division ring formation" (C. Vanhille-Campos et al. - in press).
ESCRTIII_CD_ex
Example code replicating the main simulations discussed in "Physical mechanisms of ESCRT-III-driven cell division" (Harker-Kirschneck et al. - https://www.biorxiv.org/content/10.1101/2021.03.23.436559v1.full).
little_guys
This repository contains all relevant code related to the "little guys" project: minimal molecular model for self-assembling treadmilling monomers
ipls-workshop
Setup instructions for the IPLS workshop April 2021
my_pipeline
PEPmobility
To store codes of PEP mobility runs
SGporecondensation
Small repository containing the relevant simulation and analysis code for stress-granule condensation at pore damaged vesicles. For the study of plugging effects.
SSudan-conflictsvsIPC
Python program, source data and results for the correlation between conflict appearance in the different states of South Sudan and the percentage of the population in an IPC level 3 or above (food crisis).
flee
flee agent-based modelling code
FabFlee
FabSim3 plugin for automated Flee-based simulations
cvanhille's Repositories
cvanhille/little_guys
This repository contains all relevant code related to the "little guys" project: minimal molecular model for self-assembling treadmilling monomers
cvanhille/SGporecondensation
Small repository containing the relevant simulation and analysis code for stress-granule condensation at pore damaged vesicles. For the study of plugging effects.
cvanhille/ESCRTIII_CD_ex
Example code replicating the main simulations discussed in "Physical mechanisms of ESCRT-III-driven cell division" (Harker-Kirschneck et al. - https://www.biorxiv.org/content/10.1101/2021.03.23.436559v1.full).
cvanhille/ipls-workshop
Setup instructions for the IPLS workshop April 2021
cvanhille/my_pipeline
cvanhille/PEPmobility
To store codes of PEP mobility runs
cvanhille/SSudan-conflictsvsIPC
Python program, source data and results for the correlation between conflict appearance in the different states of South Sudan and the percentage of the population in an IPC level 3 or above (food crisis).