/scge

An R package for simulating single cell gene expression data

Primary LanguageR

Single Cell Gene Expression (scge)

Build Status Coverage Status

scge is a package to simulate realistic gene expression data, initially for single cell genomics but generalisable to other sources of gene expression data. Models are fitted to reproduce the mean expression, mean-variance, mean-censorship and correlation relationships within the data. Parameters from an example fit are provided should data be unavailable.

Installation

With the devtools package installed run devtools::install_github("tom-jin/scge").