Pinned Repositories
IJPlugins
imagej_plugins
lytro
napari
napari: a PyQt5- and VisPy-based ndarray visualization tool
napari-nd2
Open Nikon ND2 file in napari
napari-nikon-nd2
Open Nikon nd2 files in napari
napari_plugins
pyfindmaxima
Replicate the Find Maxima from ImageJ in Python
Seg3D
segmenting in 3D using deep learning
cwood1967's Repositories
cwood1967/napari
napari: a PyQt5- and VisPy-based ndarray visualization tool
cwood1967/napari-nd2
Open Nikon ND2 file in napari
cwood1967/napari-nikon-nd2
Open Nikon nd2 files in napari
cwood1967/napari_plugins
cwood1967/pyfindmaxima
Replicate the Find Maxima from ImageJ in Python
cwood1967/IJPlugins
cwood1967/imagej_plugins
cwood1967/2022_Olsen_Tracking
Repository for the Book Chapter
cwood1967/afzal_z_dev2023
cwood1967/AlignTools
Utilities to help align 3View data
cwood1967/bigdataprocessor2
cwood1967/Bio-image_Analysis_with_Python
cwood1967/cellpose
a generalist algorithm for cellular segmentation
cwood1967/Converter
Converts microscopy files to ome.tiff
cwood1967/dash_mnist
cwood1967/Data_Science_Course
cwood1967/DeepLabCut
Official implementation of DeepLabCut: Markerless pose estimation of user-defined features with deep learning for all animals incl. humans
cwood1967/fijicellpose
cwood1967/IntroDataAnalysis
Repository for teaching and instruction purposes
cwood1967/LIBPB-1390-Image3C
Image cytometry clustering pipeline for classification of cell types by morphology and fluorescence features.
cwood1967/napari-paint-mask
cwood1967/napari_jroitools
Napari plugins for reading and writing ImageJ roi files and creating image profiles.
cwood1967/phenixconvert
Convert phenix multifile tiffs to managable image stacks
cwood1967/pyphenix
cwood1967/python_introDS_course
Intro to python for data science using Pandas and Jupyter Notebooks
cwood1967/scikit-image
Image processing in Python
cwood1967/Stitching
Fiji's Stitching plugins reconstruct big images from tiled input images.
cwood1967/Unet3dDash
cwood1967/Unet3Dspots
cwood1967/xlearn
Transfer learning from Mask R-CNN