cynthier

Pinned Repositories

• vscode-jupyter

  VS Code Jupyter extension

  Language:TypeScript1.3k275

• GLUE

  Graph-linked unified embedding for single-cell multi-omics data integration

  Language:Python35250

• CellChat

  R toolkit for inference, visualization and analysis of cell-cell communication from single-cell and spatially resolved transcriptomics

  Language:R21526

• stLearn

  A novel machine learning pipeline to analyse spatial transcriptomics data

  Language:Python18024

• Stereopy

  A toolkit of spatial transcriptomic analysis.

  Language:Jupyter Notebook18059

• SpaTalk

  Knowledge-graph-based cell-cell communication inference for spatially resolved transcriptomic data

  Language:R5417

• brie

  BRIE: Bayesian Regression for Isoform Estimate in Single Cells

  Language:Python4015

• NeuronChat

  Language:R244

cynthier's Repositories