cytham

cron-sync

Pseudo-realtime copying of new files

cytocad

Large copy-number variation detector using low-depth whole-genome sequencing data

irsim

IRSim: RNA-Seq Simulator for Intron Retention in Coding RNA

nanovar

Structural variant caller for low-depth long-read sequencing data

nanovar-dev

Develop branch of NanoVar (Archived)

nv_benchmark_jiang

Repository for Correspondence on NanoVar's performance outlined by Jiang et al.

telomap

A tool to analyze telomeric reads from WGS or telobait-capture long-read sequencing data

variantbreak

Structural variant analyzer for data visualization on VariantMap

variantmap

Interactive heatmap for multi-sample structural variant analysis

variantquest

A potential Dash app for holistic cohort structural variant analysis

cytham/nanovar

Structural variant caller for low-depth long-read sequencing data

cytham/telomap

A tool to analyze telomeric reads from WGS or telobait-capture long-read sequencing data

cytham/variantbreak

Structural variant analyzer for data visualization on VariantMap

cytham/cytocad

Large copy-number variation detector using low-depth whole-genome sequencing data

cytham/variantmap

Interactive heatmap for multi-sample structural variant analysis

cytham/nanovar-dev

Develop branch of NanoVar (Archived)

cytham/nv_benchmark_jiang

Repository for Correspondence on NanoVar's performance outlined by Jiang et al.

cytham/variantquest

A potential Dash app for holistic cohort structural variant analysis

cytham/cron-sync

Pseudo-realtime copying of new files

cytham/dash-bio

Open-source bioinformatics components for Dash

cytham/GitHubGraduation-2021

Join the GitHub Graduation Yearbook and "walk the stage" on June 5.

cytham/irsim

IRSim: RNA-Seq Simulator for Intron Retention in Coding RNA

cytham/NanoSim

Nanopore sequence read simulator

cytham/RBC_AML

cytham/tagore

The script presents a simple way to visualize features on human chromosome ideograms

cytham/TBlab

tblab_stuff

cytham/TukiTest