d-cole

Pinned Repositories

.vim
Contains vimrc file and colorschemes
Language:Vim Script00
cSpan_webscraper
Downloads congressional record transcripts from senate hearings
Language:Python00
dbt-bigquery
dbt-bigquery contains all of the code required to make dbt operate on a BigQuery database.
Language:Python00
dbt_artifacts
A dbt package for modelling dbt metadata. https://brooklyn-data.github.io/dbt_artifacts
Language:Shell00
igvAuto
Contains files to automate genomic viewing using Integrated Genomics Viewer
Language:Python00
Latent_5HT2A_binding_prediction
Models for prediction of 5HT2A binding affinity from SMILES
Language:Python10
ML_Numpy_TF_Misc
Various machine learning algorithms implemented in numpy/tensorflow
Language:Python00
Mutation_detect_power
Files for calculating power of mutant tests at depths.
Language:Python00
popTE
Scripts for filtering popoolationTE output
Language:Python10
simulate_SNPs
Scripts for indexing & editing .fastq files to simulate SNPs
Language:Python00

d-cole's Repositories

d-cole/Latent_5HT2A_binding_prediction
Models for prediction of 5HT2A binding affinity from SMILES
Language:Python10
d-cole/popTE
Scripts for filtering popoolationTE output
Language:Python10
d-cole/.vim
Contains vimrc file and colorschemes
Language:Vim Script00
d-cole/cSpan_webscraper
Downloads congressional record transcripts from senate hearings
Language:Python00
d-cole/dbt-bigquery
dbt-bigquery contains all of the code required to make dbt operate on a BigQuery database.
Language:Python00
d-cole/dbt_artifacts
A dbt package for modelling dbt metadata. https://brooklyn-data.github.io/dbt_artifacts
Language:Shell00
d-cole/igvAuto
Contains files to automate genomic viewing using Integrated Genomics Viewer
Language:Python00
d-cole/ML_Numpy_TF_Misc
Various machine learning algorithms implemented in numpy/tensorflow
Language:Python00
d-cole/Mutation_detect_power
Files for calculating power of mutant tests at depths.
Language:Python00
d-cole/simulate_SNPs
Scripts for indexing & editing .fastq files to simulate SNPs
Language:Python00
d-cole/Effect-of-RefBase-on-hetzRead-mapping
Analysis of the influence of the reference base on the frequency of mapped bases at heterozygous sites.
Language:Python1 0
d-cole/gvcfParsing
Scripts for parsing GATK .gvcf files
Language:Python
d-cole/mpileup_parser_MA
Parsing & analysis of .mpileup files for a mutation accumulation experiment
Language:Python1 0
d-cole/MutationAccumulation_PreprocAnalysis
Contains files for Spirodela polyrhiza mutation accumulation experiment
Language:Python
d-cole/trino-python-client
Python client for Trino