Pinned Repositories
do-llama3
Scripts for inference with Llama3
mhscanR
An R package for quantifying microhomologies in pre-mapped DNA sequencing of CRISPR/Cas9 deletions
NSD2_BioID
NSD2 BioID analysis
alignR
Function for aligning protein sequences in R
unicoRn
R multiple sequence alignment tool for conservation analysis of proteins listed in uniprot
GID4_analysis
Analysis of data for GID4 manuscript
Bash-scripts
helper Bash scripts
d0minico.github.io
website
do-gpt
Aspirational repo for training a small gpt
domainScanR
Shiny app and R function for quantifying enrichment of domains in a set of proteins
d0minicO's Repositories
d0minicO/d0minico.github.io
website
d0minicO/do-llama3
Scripts for inference with Llama3
d0minicO/gpu_testing
Testing performance of new GPU
d0minicO/do-gpt
Aspirational repo for training a small gpt
d0minicO/NSD2_BioID
NSD2 BioID analysis
d0minicO/alignR
Function for aligning protein sequences in R
d0minicO/Bash-scripts
helper Bash scripts
d0minicO/unimachR
R function for matching uniprot IDs to HGNC-compliant gene names
d0minicO/domainScanR
Shiny app and R function for quantifying enrichment of domains in a set of proteins
d0minicO/unicoRn
R multiple sequence alignment tool for conservation analysis of proteins listed in uniprot
d0minicO/UCSC_bigWIgs
host bigwigs for UCSC
d0minicO/GID4_analysis
Analysis of data for GID4 manuscript
d0minicO/UCSC_2
d0minicO/phosphoR
analyse phosphosite data on ubiquitination / phosphorylation of proteins
d0minicO/Owens_et_al_Tiled-C
Scripts for anlaysis of Tiled-C data
d0minicO/mhscanR
An R package for quantifying microhomologies in pre-mapped DNA sequencing of CRISPR/Cas9 deletions