/ExtractGenomicFeatures

Extract genomic features using bedtools and gtftk

Primary LanguagePython

ExtractGenomicFeatures

Extract genomic features using bedtools and gtftk. This script also requires snakemake.

Prerequisites

  • bedtools
  • gtftk

Use conda to install bedtools and gtftk and required prerequisites.

Run

snakemake -s extract.smk {output}