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cookiecutter-quarto-workflow

Cookiecutter template for snakemake workflows and quarto website project documentation. This project template is inspired by this cookiecutter snakemake project template and the suggested project structure for workflowr R package for creating a static site from Rmarkdown files. I use the project template as follows:

USAGE

Install cookiecutter:

pip install cookiecutter

Start creating a snakemake-workflow from cookiecutter:

cookiecutter https://github.com/daiuc/cookiecutter-wflowR-smk.git