how to mask gap regions for randomization?
yangsui0122 opened this issue · 1 comments
yangsui0122 commented
Hi there,
I was wondering if I have two files, a.bed and b.bed, how can I randomize a.bed and intersect it with b.bed on certain chromosome and mask the centromere and gaps by using pybedtools.BedTool.randomintersection()?
Thanks,
YS
daler commented
This is not currently supported, but happy to take pull requests to implement this.