Pinned Repositories
seeker
A suite of javascript apps for visualizing sequencing data
life
A game of life implemented in javascript with react.js
gene-ontology-visualization
Visualization of gene ontology as a graph structure using D3.js
smed-neoblast-analysis
IPython notebook for analysis of various planarian neoblast datasets
lazyGrid
Javascript grid display that lazy loads data
ngsData-download
Download NGS data from NCBI via aspera connect and fetch XML information for NGS runs with e-utils
content_test
data-analysis
Python/R scripts used in data analysis
dl-svg
Javascript for downloading an svg element as a .svg file.
damiankao's Repositories
damiankao/content_test
damiankao/phaw_genome
IPython notebooks for the assembly and analysis of the Parhyale hawaiensis genome
damiankao/misc-analysis
damiankao/mlig-regeneration-transcriptome
ipython notebooks for the m. lignano regeneration transcriptome
damiankao/sequitur
damiankao/smed-neoblast-analysis
IPython notebook for analysis of various planarian neoblast datasets
damiankao/SCUBAT2
damiankao/planarian-genomes
Assembly of G.tigrina and D.japonica
damiankao/planarian-regeneration-transcriptomics
Supplemental scripts used in the planarian regeneration publication. Also includes additional scripts for thesis.
damiankao/ngsData-download
Download NGS data from NCBI via aspera connect and fetch XML information for NGS runs with e-utils
damiankao/smed-strain-variant
Variant analysis of different smed lab lines around the world
damiankao/trinity-visualization
Visualizing component graphs from Trinity output
damiankao/IntervalTree
Interval tree implemented in python with querying in python and javascript
damiankao/dl-svg
Javascript for downloading an svg element as a .svg file.
damiankao/data-analysis
Python/R scripts used in data analysis
damiankao/Fray
A two player match-3 game
damiankao/ec2-nginx-bottle-redis
Scripts and config files to setup a AWS EC2 instance with nginx, bottle.py and redis
damiankao/gene-ontology-visualization
Visualization of gene ontology as a graph structure using D3.js
damiankao/lazyGrid
Javascript grid display that lazy loads data
damiankao/life
A game of life implemented in javascript with react.js
damiankao/seeker
A suite of javascript apps for visualizing sequencing data