daniel-spies

Pinned Repositories

CS-CORE_python
Python package for CS-CORE, a statistical method for cell-type-specific co-expression inference from single cell RNA-sequencing data
Language:Jupyter Notebook7 1 20
regression_low_flow
Low Flow Regression Modeling
Language:MATLAB0 2 00
rna-seq_tcComp
Comparison of RNA-seq time course differential expression analysis tools
Language:R12 4 37
topometry
Systematically learn and evaluate manifolds from high-dimensional data
Language:Python95 4 134
schist
An interface for Nested Stochastic Block Model for single cell analysis
Language:Python32 2 275
pycogaps
python API to the CoGAPS NMF package
Language:Python16 7 276
dynamicTreeCut
Python translation of the hybrid dynamicTreeCut method as created by Peter Langfelder and Bin Zhang.
Language:Python39 3 911
seurat
R toolkit for single cell genomics
Language:R2.3k 76 8.1k922

daniel-spies's Repositories

daniel-spies/rna-seq_tcComp
Comparison of RNA-seq time course differential expression analysis tools
Language:R12 4 37
daniel-spies/regression_low_flow
Low Flow Regression Modeling
Language:MATLAB0 2 00