danielkovtun

danielkovtun's Stars

• aaronwangy/Data-Science-Cheatsheet

  A helpful 5-page machine learning cheatsheet to assist with exam reviews, interview prep, and anything in-between.

  Language:TeX5k1519721

• pulsar-edit/pulsar

  A Community-led Hyper-Hackable Text Editor

  Language:JavaScript3.4k53456144

• openworm/OpenWorm

  Repository for the main Dockerfile with the OpenWorm software stack and project-wide issues

  Language:Python2.7k160297214

• chaidiscovery/chai-lab

  Chai-1, SOTA model for biomolecular structure prediction

  Language:Python1.5k23130189

• kyegomez/AlphaFold3

  Implementation of Alpha Fold 3 from the paper: "Accurate structure prediction of biomolecular interactions with AlphaFold3" in PyTorch

  Language:Python766266103

• biotite-dev/biotite

  A comprehensive library for computational molecular biology

  Language:Python71016197103

• drivendataorg/cloudpathlib

  Python pathlib-style classes for cloud storage services such as Amazon S3, Azure Blob Storage, and Google Cloud Storage.

  Language:Python4911028164

• oddt/oddt

  Open Drug Discovery Toolkit

  Language:Python4252296120

• lightdock/lightdock

  Protein-protein, protein-peptide and protein-DNA docking framework based on the GSO algorithm

  Language:Python314126943

• adaptyvbio/ProteinFlow

  Versatile computational pipeline for processing protein structure data for deep learning applications.

  Language:Python24781717

• plinder-org/plinder

  Protein Ligand INteraction Dataset and Evaluation Resource

  Language:Python18991811

• Oloren-AI/olorenchemengine

  OCE is the first infinitely composable library for reproducibly implementing SOTA molecular property prediction/QSAR techniques.

  Language:Python9852115

• pinder-org/pinder

  PINDER: The Protein INteraction Dataset and Evaluation Resource

  Language:Python976157

• Graylab/GeoDock

  Flexible Protein-Protein Docking with a Multi-Track Iterative Transformer.

  Language:Python8751415

• peopledoc/mlvtools-tutorial

  Tutorial for a new versioning Machine Learning pipeline

  Language:JavaScript8138112

• rxdock/rxdock

  RxDock is a fork of rDock. Note: the latest code is under development. Please do git checkout patched-rdock after clone if you want patched rDock. [IMPORTANT NOTE: pull requests should be posted on GitLab, this is a read-only source code mirror]

  Language:C++682019

• melobio/EvoPlay

  Language:Python6641011

• kolibril13/ipyMolecularNodes

  molecular plots in Jupyter, powererd by Blender Geometry Nodes

  Language:Jupyter Notebook55238

• PatWalters/solubility

  An implementation of Delaney's ESOL method using the RDKit

  Language:Python544221

• JanoschMenke/metis

  Python-based GUI to collect Feedback of Chemist in Molecules

  Language:Python462312

• biotite-dev/fastpdb

  A high performance drop-in replacement for Biotite's PDBFile.

  Language:Rust34162

• lightdock/lightdock-rust

  A Rust implementation of the LightDock macromolecular docking software

  Language:Rust26985

• aivant/ShapeLinker

  Language:Jupyter Notebook221513

• LBC-LNBio/pyKVFinder

  pyKVFinder: Python-C parallel KVFinder

  Language:Python2241510

• glotzerlab/rowan

  A Python package for working with quaternions.

  Language:Python178169

• waltonseymour/visualizer

  Music visualizer built with WASM, Canvas, and Web Audio API

  Language:Rust16215

• biotite-dev/molmarbles

  A bridge between Biotite and OpenMM

  Language:Python13101

• hypebright/sqlite_wasm_shiny

  Demonstration on how to use sql.js (a javascript library to run SQLite on the web) with Shiny

  Language:JavaScript9301