danihae
Postdoctoral researcher | Biophysics, Data Science, Bio-image Analysis, Complexity
University of GöttingenGöttingen, Germany
Pinned Repositories
bio-image-unet
U-Net implementation in PyTorch for segmentation of bio-images
cellGPU
GPU-accelerated simulations of Voronoi and vertex models of cells. Initial version published in Computer Physics Communications: https://doi.org/10.1016/j.cpc.2017.06.001
cellGPU_install
danihae.github.io
My webpage
DeepProjection
Trainable 2D projection of 3D microscopy stacks using deep learning
flownet2-pytorch
Pytorch implementation of FlowNet 2.0: Evolution of Optical Flow Estimation with Deep Networks
pygmo2
A Python platform to perform parallel computations of optimisation tasks (global and local) via the asynchronous generalized island model.
SarcTrack2
Sarcomere Detection and Contraction Analysis
cellGPU
GPU-accelerated simulations of Voronoi and vertex models of cells. Initial version published in Computer Physics Communications: https://doi.org/10.1016/j.cpc.2017.06.001
danihae's Repositories
danihae/DeepProjection
Trainable 2D projection of 3D microscopy stacks using deep learning
danihae/bio-image-unet
U-Net implementation in PyTorch for segmentation of bio-images
danihae/cellGPU
GPU-accelerated simulations of Voronoi and vertex models of cells. Initial version published in Computer Physics Communications: https://doi.org/10.1016/j.cpc.2017.06.001
danihae/cellGPU_install
danihae/danihae.github.io
My webpage
danihae/flownet2-pytorch
Pytorch implementation of FlowNet 2.0: Evolution of Optical Flow Estimation with Deep Networks