Check out our project page
- Heart mesh generation for biomechanics in <1 second
- dcvm python package for pytorch model inference
- 3D Slicer visualization for inference
![](https://private-user-images.githubusercontent.com/21160618/253799867-b4d23754-e976-46bd-815b-45257cffe6e7.png?jwt=eyJhbGciOiJIUzI1NiIsInR5cCI6IkpXVCJ9.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.89taAb83DWmkDC375LL89PLz1ugIecHMruNQ4kqzWKI)
![](https://private-user-images.githubusercontent.com/21160618/253799869-eed2dd5e-34e6-4d76-b1d5-d2251d34789e.png?jwt=eyJhbGciOiJIUzI1NiIsInR5cCI6IkpXVCJ9.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.8pfB4vCL7JesmsKgVzLd_fo1ZijT73s0Y-isl0D6548)
- Windows or Linux (requires CUDA for now)
- Download 3D slicer
Check our project page for video instructions!
@article{pak2023patient,
title={Patient-specific Heart Geometry Modeling for Solid Biomechanics using Deep Learning},
author={Pak, Daniel H and Liu, Minliang and Kim, Theodore and Liang, Liang and Caballero, Andres and Onofrey, John and Ahn, Shawn S and Xu, Yilin and McKay, Raymond and Sun, Wei and others},
journal={IEEE Transactions on Medical Imaging},
year={2023},
publisher={IEEE}
}
@inproceedings{pak2021distortion,
title={Distortion Energy for Deep Learning-Based Volumetric Finite Element Mesh Generation for Aortic Valves},
author={Pak, Daniel H and Liu, Minliang and Kim, Theodore and Liang, Liang and McKay, Raymond and Sun, Wei and Duncan, James S},
booktitle={International Conference on Medical Image Computing and Computer-Assisted Intervention},
pages={485--494},
year={2021},
organization={Springer}
}