Pinned Repositories
10x-scATAC-2019
Publication Page for Satpathy*, Granja* et al 2019
B_LUAD
bms038_analysis
Code and additional processed data for manuscript "Tumor and Microenvironment Evolution during Immunotherapy with Nivolumab"; see for manuscript https://doi.org/10.1016/j.cell.2017.09.028 See also http://www.ioexplorer.org for interactive visuallization
DNMT3A1N_terminus
Immunophenogram
In-depth-NGS-Data-Analysis-Course
Materials for 12-day course on analyzing RNA-Seq, ChIP-Seq and variant calling data.
MAT3UTR
A mathematical model for trans effect of 3'UTR shortening in ceRNA
multi-omic-urothelial-anti-pdl1
Contribution of systemic and somatic factors to clinical response and resistance in urothelial cancer: an exploratory multi-omic analysis
VanAllen_CTLA4_Science_RNASeq_TPM
Contains TPM matrix (produced by RSEM) for pre-treatment samples from N = 42 ipilimumab-treated melanoma patients published in Van Allen et al. Science 2015.
dapenghao's Repositories
dapenghao/B_LUAD
dapenghao/DNMT3A1N_terminus
dapenghao/bms038_analysis
Code and additional processed data for manuscript "Tumor and Microenvironment Evolution during Immunotherapy with Nivolumab"; see for manuscript https://doi.org/10.1016/j.cell.2017.09.028 See also http://www.ioexplorer.org for interactive visuallization
dapenghao/10x-scATAC-2019
Publication Page for Satpathy*, Granja* et al 2019
dapenghao/Immunophenogram
dapenghao/In-depth-NGS-Data-Analysis-Course
Materials for 12-day course on analyzing RNA-Seq, ChIP-Seq and variant calling data.
dapenghao/MAT3UTR
A mathematical model for trans effect of 3'UTR shortening in ceRNA
dapenghao/multi-omic-urothelial-anti-pdl1
Contribution of systemic and somatic factors to clinical response and resistance in urothelial cancer: an exploratory multi-omic analysis
dapenghao/VanAllen_CTLA4_Science_RNASeq_TPM
Contains TPM matrix (produced by RSEM) for pre-treatment samples from N = 42 ipilimumab-treated melanoma patients published in Van Allen et al. Science 2015.