dariushghasemi

complement_haplotype

Haplotype analysis for complement system activation GWAS project

GENESIS

GENetic EStimation and Inference in Structured samples (GENESIS): Statistical methods for analyzing genetic data from samples with population structure and/or relatedness

GWAS_UKBB_REGENIE

Running GWAS on Kidney's latent phenotypes via REGENIE v.2.1

kidneyInCHRIS

Genetic determinants of Kidney function in the CHRIS study

learning_docker

Getting started with Docker

metabolites_Mediation_Analysis

Mediation analysis using metabolites

OpenBio

pqtl_pipeline_ldsc

In the repository, we work on the LD Score regression analysis, a part of the pQTL pipeline.

proteins_MA

Proteins Mediation Analysis in CHRIS

UK_Biobank_GWAS

Overview of the data QC, code, and GWAS summary output from the 2017 UK Biobank data release

dariushghasemi/complement_haplotype

Haplotype analysis for complement system activation GWAS project

dariushghasemi/GWAS_UKBB_REGENIE

Running GWAS on Kidney's latent phenotypes via REGENIE v.2.1

dariushghasemi/pqtl_pipeline_ldsc

In the repository, we work on the LD Score regression analysis, a part of the pQTL pipeline.

dariushghasemi/kidneyInCHRIS

Genetic determinants of Kidney function in the CHRIS study

dariushghasemi/metabolites_Mediation_Analysis

Mediation analysis using metabolites

dariushghasemi/pqtl_pipeline_finemap

Fine mapping analysis within the pQTL pipeline project

dariushghasemi/susie_pqtls

Here we run SuSiE using on the meta-analysis GWAS results via in-sample LD.

dariushghasemi/proteins_MA

Proteins Mediation Analysis in CHRIS

dariushghasemi/2022-July-Workshop

2022 July Workshop

dariushghasemi/applyingVEP

Finding rsIDs of the variants using Variant Effect Predictor (VEP)

dariushghasemi/bioinformatics-workbook

Bioinformatics Workbook repository

dariushghasemi/DariushG3

Config files for my GitHub profile.

dariushghasemi/dariushghasemi

Config files for my GitHub profile.

dariushghasemi/dariushghasemi.github.io

Personal website

dariushghasemi/datascience-workbook

Tutorials and introduction to linux and high performance computing

dariushghasemi/Diabetes-Diagnosis-via-DNNs

Applying Machine Learning Techniques based on A Deep Neural Networks Model to Stratify the Risk of Type 2 Diabetes Mellitus in Sari Citizens, Iran

dariushghasemi/diabetes_PGS

Estimating Polygenic Score using SBayesRC paradigm

dariushghasemi/GTIPI2022_materials

dariushghasemi/LSTM_for_Regression

dariushghasemi/Machine_Learning-USU

Github repository for machine learning course owned and maintained by prof. Jahangiry

dariushghasemi/MR_Course2022_Practical_Sessions

My scripts to exercise the practical sessions of the 2022 Cambridge MR course

dariushghasemi/my_GWAS_pipeline_via_REGENIE

This is my used steps for running GWAS on eGFR using REGENIE v1.0.6.7

dariushghasemi/nf-gwas

A nextflow pipeline to perform genome-wide association studies using regenie.

dariushghasemi/pooled_regression

Performing regression analysis for pooled econometrics data

dariushghasemi/sagenet

Spatial reconstruction of dissociated single-cell data

dariushghasemi/Slides_Search_and_synthesis_group

This is the slides to be presented at the webinar for the Search and synthesis Group in Persian on Sunday 18:30 CET 31 July 2022.

dariushghasemi/SNP-TSHcat_Interaction_Model

dariushghasemi/swiss

Software to help identify overlap between association scan results and GWAS hit catalogs.

dariushghasemi/two_sample_MR

A two-sample Mendelian randomization analysis during Dianne's stay at Eurac Research

dariushghasemi/variant_interrogation

Querying multiple SNPs in genomic databases