Pinned Repositories
d_code
2Photon Imaging and Electrophysiology Analysis code for the Datta Lab @ HMS
dopamine-reinforces-spontaneous-behavior
Repository holding the jupyter notebooks and python packages used to generate figures in our paper: "Spontaneous behaviour is structured by reinforcement without explicit reward"
jax-moseq
keypoint-moseq
mongowrapper
A wrapper for MongoDB that makes saving and loading NumPy arrays transparent.
moseq-drugs
moseq-vame
Variational Animal Motion Embedding
moseq2-app
MoSeq2 Jupyter Notebook platform used to run all of the MoSeq2 tools in a GUI.
moseq2-docs
This documentation is out of date.
spike_finder
Datta Lab's Repositories
dattalab/keypoint-moseq
dattalab/mongowrapper
A wrapper for MongoDB that makes saving and loading NumPy arrays transparent.
dattalab/moseq2-app
MoSeq2 Jupyter Notebook platform used to run all of the MoSeq2 tools in a GUI.
dattalab/d_code
2Photon Imaging and Electrophysiology Analysis code for the Datta Lab @ HMS
dattalab/moseq-drugs
dattalab/dopamine-reinforces-spontaneous-behavior
Repository holding the jupyter notebooks and python packages used to generate figures in our paper: "Spontaneous behaviour is structured by reinforcement without explicit reward"
dattalab/moseq2-docs
This documentation is out of date.
dattalab/moseq-vame
Variational Animal Motion Embedding
dattalab/jax-moseq
dattalab/moseq2-extract
Here it comes...
dattalab/pyparticles
dattalab/Tsukahara_Brann_OSN
dattalab/orbbec-acquire
Toolkit to acquire data using Orbbec Femto cameras.
dattalab/behavior_PirCtx_gonogo
Behavior Arduino & Matlab codes
dattalab/kinect2-nidaq
Interface for simultaneous NI-DAQ and Kinect v2 acquisition
dattalab/moseq2-model
Python scripts for linking kinect-extraction to pybasicbayes
dattalab/moseq2-pca
Code for computing pcs from extracted data to submit for modeling
dattalab/moseq2-viz
Visualization toolbox for MoSeq2
dattalab/azure-acquire
Toolkit to acquire data using Microsoft Azure camera
dattalab/cortical-representations-odour-space
dattalab/luigi
Luigi is a Python module that helps you build complex pipelines of batch jobs. It handles dependency resolution, workflow management, visualization etc. It also comes with Hadoop support built in.
dattalab/non-neuronal-covid-anosmia
dattalab/piriform
dattalab/Population-coding-in-an-Innately-Relevant-Olfactory-Area
dattalab/pyhsmm-autoregressive
autoregressive plugin
dattalab/slurm-gcp
Slurm on Google Cloud Platform
dattalab/spikestim
dattalab/spontaneous-behavior-reflects-individuality-not-estrous
Scripts used for creating the figures for the publication: Mouse spontaneous behavior reflects individual variation rather than estrous state
dattalab/spUtils
dattalab/striatum-3d-action-selection
Contains code to reproduce key figures from "The striatum organizes 3D behavior via moment-to-moment action selection"