dauparas/LigandMPNN

Multiple sequence design for one target

lzygitk7 opened this issue · 2 comments

lzygitk7 commented

Does LigandMPNN have the same argument as ProteinMPNN?

argparser.add_argument("--num_seq_per_target", type=int, default=1, help="Number of sequences to generate per target")

The side chain argument: --number_of_packs_per_design does not seem to affect the protein sequence level.
Or LigandMPNN can only generate one sequence per target?

ShuhaoGithub commented

(Not author) It's replaced by number of batches and batch size.

  • 👍1
lzygitk7 commented

(Not author) It's replaced by number of batches and batch size.

Got it. Thank you very much.