davetang

Just a dude trying to learn computational stuff and disseminating said stuff onto the interweb.

davetangdotorgTokyo

Pinned Repositories

defining_genomic_regions
Define regions in the genome
Language:Perl23 3 012
learning_bam_file
Learning the Sequence Alignment/Map format
Language:Perl110 8 022
learning_docker
Learning about Docker.
Language:Dockerfile49 4 217
learning_random_forest
Notes and code for learning Random Forests
12 3 011
learning_vcf_file
Learning the Variant Call Format
Language:Perl136 10 240
machine_learning
Machine learning in R
Language:R28 8 09
reproducible_bioinformatics
Workshop material for BioC Asia 2019
Language:R12 3 01
research_parasite
How research parasites can download your data!
Language:Shell13 2 00
romim
R package for querying the OMIM database
Language:R15 4 13
sars_cov_2
Bioinformatics analysis of SARS-CoV-2
Language:Perl18 4 06

davetang's Repositories

davetang/learning_vcf_file
Learning the Variant Call Format
Language:Perl136 10 240
davetang/learning_bam_file
Learning the Sequence Alignment/Map format
Language:Perl110 8 022
davetang/learning_docker
Learning about Docker.
Language:Dockerfile49 4 217
davetang/sars_cov_2
Bioinformatics analysis of SARS-CoV-2
Language:Perl18 4 06
davetang/learning_bash
My Bash notes
Language:Shell11 2 00
davetang/getting_started_with_c
Learning how to code in C
Language:C8 5 02
davetang/learning_python
My repository for learning Python
Language:Jupyter Notebook6 3 0
davetang/learning_r
R notes
Language:R6 2 0
davetang/rnaseq
RNA-seq analyses.
Language:Shell6 2 05
davetang/bioinformatics_tips
Language:R5 3 0
davetang/importbio
Language:R4 3 0
davetang/cookiemonster
Cookiecutter templates
Language:Shell3 2 0
davetang/getting_started_with_git
Learning Git
Language:Shell2 3 01
davetang/learning_singularity
Learning about Singularity (the container platform and not the technological singularity)
Language:Shell2 1 01
davetang/learning_vim
Vim notes
Language:Vim Script2
davetang/scrnaseq
Single cell RNA sequencing
Language:Makefile2
davetang/the_bioinformatics_journey
My bioinformatics journey
Language:Dockerfile2 2 0
davetang/install_scripts
Scripts to install tools
Language:Shell1 2 0
davetang/learning_nextflow
Learning about Nextflow.
Language:Nextflow1 2 0
davetang/learning_quarto
Quarto is a multi-language, next-generation version of R Markdown from Posit
Language:JavaScript1 2 0
davetang/learning_rust
Language:Rust1 2 0
davetang/muse
Updated posts from my blog
Language:R1 3 01
davetang/onemanarmy
Sometimes you just need to know everything, whether you like it or not
1 2 0
davetang/vcf_example
An example VCF file to be used for testing/teaching purposes
Language:Shell1 2 0
davetang/benchmark
Benchmarks
Language:Shell2 0
davetang/davetang
3 0
davetang/grokking_pca
Grokking PCA
Language:R
davetang/learning_ansible
Learning about Ansible
Language:Shell
davetang/learning_aws
Learning about Amazon Web Services
2 0
davetang/learning_linux
Linux notes
Language:Makefile2 0