Pinned Repositories
bioconda-recipes
Conda recipes for the bioconda channel.
colormap
Colormap recommendation
davidemms.github.io
OrthoFinder Tutorials
dlcpar
Modeling gene duplication, loss, and coalescence (through parsimony)
Open_Orthobench
OrthoFinder
Phylogenetic orthology inference for comparative genomics
SHOOT
SHOOT.bio - the phylogenetic search engine
shoot_webserver
STAG
STAG: Species Tree from All Genes
STRIDE
STRIDE: Species Tree Root Inference from Gene Duplication Events
davidemms's Repositories
davidemms/OrthoFinder
Phylogenetic orthology inference for comparative genomics
davidemms/STAG
STAG: Species Tree from All Genes
davidemms/SHOOT
SHOOT.bio - the phylogenetic search engine
davidemms/STRIDE
STRIDE: Species Tree Root Inference from Gene Duplication Events
davidemms/Open_Orthobench
davidemms/shoot_webserver
davidemms/bioconda-recipes
Conda recipes for the bioconda channel.
davidemms/colormap
Colormap recommendation
davidemms/davidemms.github.io
OrthoFinder Tutorials
davidemms/dlcpar
Modeling gene duplication, loss, and coalescence (through parsimony)
davidemms/ensembl-compara
The Ensembl Compara Perl API and SQL schema
davidemms/google-10000-english
This repo contains a list of the 10,000 most common English words in order of frequency, as determined by n-gram frequency analysis of the Google's Trillion Word Corpus.
davidemms/interpolation
davidemms/numpy
Numpy main repository
davidemms/OrthoFinder-Dockerfile
Dockerfile for davidemms/OrthoFinder
davidemms/portcullis
Splice junction analysis and filtering from BAM files
davidemms/qfo_utils
Utility scripts for mapping between Quest for Orthologs and Orthobench datasets