Pinned Repositories
3DPatch
A web application for the calculation and visualization of evolutionary conservation in protein 3D structures.
3DPatch-local
A command-line implementation of the 3DPatch pipeline.
GROMACS-recipes
A collection of tutorials for running MD simulations using GROMACS.
INTAA-conservation
The pipeline used to calculate evolutionary conservation featured in the INTAA web server.
rin.py
A Python module for the construction and analysis of residue interaction networks in biomolecular 3D structures.
davidjakubec's Repositories
davidjakubec/3DPatch
A web application for the calculation and visualization of evolutionary conservation in protein 3D structures.
davidjakubec/GROMACS-recipes
A collection of tutorials for running MD simulations using GROMACS.
davidjakubec/INTAA-conservation
The pipeline used to calculate evolutionary conservation featured in the INTAA web server.
davidjakubec/rin.py
A Python module for the construction and analysis of residue interaction networks in biomolecular 3D structures.
davidjakubec/3DPatch-local
A command-line implementation of the 3DPatch pipeline.