Pinned Repositories
CeRNetwork
codeclr
Final project for Stanford's CS329M (Machine Programming). Unsupervised contrastive learning of code embeddings.
crochetplanner
Tool for rapidly planning large and complex crochet projects.
davidjtoomer
davidtoomer.com
Personal website [IN PROGRESS]
egnn-pool
E(n)-equivariant pooling for graph neural networks.
Impact-Visualizer
A Plotly-Dash web app to visualize surface profilometry data.
led-simon
A basic implementation of the game Simon on an 8x8 LED array with an Arduino UNO.
openmm-numpy-reporters
Python reporters for simulations in OpenMM saved in the NumPy file format (.npy). Ideal for storing e.g. forces, velocities, potential energies of conformations in simulations that are easily loaded into NumPy arrays.
RetroCHEM
A command-line tool for simple, single-step retrosynthetic reaction prediction using graph partitioning.
davidjtoomer's Repositories
davidjtoomer/RetroCHEM
A command-line tool for simple, single-step retrosynthetic reaction prediction using graph partitioning.
davidjtoomer/Impact-Visualizer
A Plotly-Dash web app to visualize surface profilometry data.
davidjtoomer/openmm-numpy-reporters
Python reporters for simulations in OpenMM saved in the NumPy file format (.npy). Ideal for storing e.g. forces, velocities, potential energies of conformations in simulations that are easily loaded into NumPy arrays.
davidjtoomer/CeRNetwork
davidjtoomer/codeclr
Final project for Stanford's CS329M (Machine Programming). Unsupervised contrastive learning of code embeddings.
davidjtoomer/crochetplanner
Tool for rapidly planning large and complex crochet projects.
davidjtoomer/davidjtoomer
davidjtoomer/davidtoomer.com
Personal website [IN PROGRESS]
davidjtoomer/egnn-pool
E(n)-equivariant pooling for graph neural networks.
davidjtoomer/led-simon
A basic implementation of the game Simon on an 8x8 LED array with an Arduino UNO.
davidjtoomer/meta-learn-force-fields
Learning neural network potentials using meta-learning. Final project for Stanford's CS330: Deep Multi-Task and Meta-Learning
davidjtoomer/Proteomic-Profiling
A protein subcellular location labeler, developed for use in the Svensson Lab at the Stanford School of Medicine Department of Pathology.
davidjtoomer/santa-clara-covid
Live visualizations of public COVID-19 data in Santa Clara County.