davidmeunier79/AnDOChecker

Checks the validity of a directory with respect to the ANimal Data Organization (ANDO) specifications

AnDOChecker

Checks the validity of a directory with respect to the ANimal Data Organization (AnDO) specifications

Table of Contents

• AnDOChecker
  • Table of Contents
  • Use
    • Clone
    • General usage
    • Specific usage
  • Development
    • Testing usage
  • Details

Use

Clone

• Clone this repo to your local machine using https://github.com/INT-NIT/AnDOChecker.git

General usage

usage: AnDOChecker.py [-h] [-v] path

positional arguments:
  path           Path to your folder

optional arguments:
  -h, --help     show this help message and exit
  -v, --verbose  increase output verbosity

Specific usage

$Python3 checker/AnDOChecker.py tests/ds001/data/Enya

OR verbose usage

$Python3 checker/AnDOChecker.py -v tests/ds001/data/Enya

Development

Testing usage

$cd checker/
$python3.5 -m unittest discover -v

Details

In checker folder :

• file AnDOChecker.py is the main file
• file AnDO_Error.py is the custom error exception file
• file AnDO_Engine.py is the file that verify with the rules

In the rules folder :

• session_rules.json regex for session rules
• subject_rules.json regex for subject rules
• source_rules.json regex for source rules