/covid-vaccine-timeline-preprint

Work on a covid vaccine timelines preprint

Primary LanguageTeX

COVID Vaccine Timelines

This is a repository for writing a paper to accomany this analysis of COVID vaccine timelines.

This repository uses the bookdown package for cross-referencing and rticles for the arxiv template. To install:

devtools::install_github('rstudio/bookdown')
devtools::install_github("rstudio/rticles")

References are generated using Zotero with the Better BibTex extension.

To build the report, navigate to the report folder and run

bookdown::render_book("index.Rmd", "bookdown::pdf_book")

The directories are:

bookdown-example: contains a minimal bookdown book example which might be a helpful reference for some purposes. It is for reference purposes only

report: contains the Rmd files comprising the report

  • index.Rmd: header file for the report, including the abstract
  • 01_introduction: introduction
  • 02_methods.Rmd: methods section (simulation and counterfactual generation)
  • 03_results.Rmd: results section
  • 04_discussion_conclusion: discussion and conclusion
  • 05_appendix.Rmd: appendix section (sensitivity analysis, comparison to Watson et. al.)
  • _bookdown.yml: optional build settings
  • _output.yml: specify book output formats and format-specific settings
  • report.bib: BibTex references