Pinned Repositories
CommunityMoments
Python code for calculating moments in cell communities
CommunityMoments
Python code for calculating moments in cell communities
ABC
Approximate bayesian computation notebooks.
Bayesian-Fitting
Modelling Hill and Gompertz functions using Maximum Likelihood Estimation (MLE) and Bayesian fitting.
Bioinformatics-Tools
A collection of python scripts for various DNA sequence editing and data parsing.
Distribution-Models
Basic distribution models in IPython.
Cell-Communication
Simulations of reaction-diffusion in an array of cells.
Spatiotemporal-Modelling
PSE simulations of quorum sensing cells.
Bistability
Negative-Feedback
Models of auto regulatory negative feedback gene circuits.
davidtgonzales's Repositories
davidtgonzales/PGC-Game
DNA sequencing game.
davidtgonzales/CommunityMoments
Python code for calculating moments in cell communities
davidtgonzales/ABC
Approximate bayesian computation notebooks.
davidtgonzales/Spatiotemporal-Modelling
PSE simulations of quorum sensing cells.
davidtgonzales/Cell-Communication
Simulations of reaction-diffusion in an array of cells.
davidtgonzales/Bistability
davidtgonzales/Synchronized-Clocks
Model from "A synchronized quorum of genetic clocks" (https://www.nature.com/articles/nature08753).
davidtgonzales/Negative-Feedback
Models of auto regulatory negative feedback gene circuits.
davidtgonzales/Bioinformatics-Tools
A collection of python scripts for various DNA sequence editing and data parsing.
davidtgonzales/Bayesian-Fitting
Modelling Hill and Gompertz functions using Maximum Likelihood Estimation (MLE) and Bayesian fitting.
davidtgonzales/Stochastic-Modelling
Stochastic models of biological systems and genetic circuits in IPython.
davidtgonzales/Distribution-Models
Basic distribution models in IPython.