Pinned Repositories
AAnet
Archetypal Analysis network (AAnet)
Coculture-ABM-Model
Metaheuristic-Algorithms
Implementation of metaheuristic algorithms and empirical analysis
Research-Scripts
Modelling (CompuCell3D, CHASTE & CellProfiler) and image analysis for M.Sc. thesis at UBC
CurveNet
Diffusion curvature and Hessian prediction using point samples from quadratic hypersurfaces
GSTH
LearnableScattering
Learnable Geometric Scattering Network
ProtSCAPE
RiTINI
Regulatory Temporal Interaction Network Inference
TrajectoryNet
TrajectoryNet: A Dynamic Optimal Transport Network for Modeling Cellular Dynamics
dbhaskar92's Repositories
dbhaskar92/Research-Scripts
Modelling (CompuCell3D, CHASTE & CellProfiler) and image analysis for M.Sc. thesis at UBC
dbhaskar92/Coculture-ABM-Model
dbhaskar92/Metaheuristic-Algorithms
Implementation of metaheuristic algorithms and empirical analysis
dbhaskar92/AAnet
Archetypal Analysis network (AAnet)
dbhaskar92/AMS-MRC-2018
AMS Agent-Based Modeling Workshop
dbhaskar92/awesome-tda
A curated list of topological data analysis (TDA) resources and links.
dbhaskar92/BrownU-BioMed
Agent-based models, image segmentation and TDA for doctoral research at BrownU
dbhaskar92/challenge-iclr-2022
GitHub repository for the ICLR Computational Geometry & Topology Challenge 2021
dbhaskar92/fMRI-Reconstruction
Reconstruct fMRI from MEG and vice-versa
dbhaskar92/MPSO-ParamILS
Using ParamILS to configure memetic particle swarm optimization algorithm
dbhaskar92/dbhaskar92
dbhaskar92/dbhaskar92.github.io
Personal academic website
dbhaskar92/ENGN2560_DL_Lab
dbhaskar92/GEFMAP
GEFMAP leverages the graph structure of metabolic networks to learn the metabolic objective of cells and estimate relative flux rates of reactions
dbhaskar92/ipsearch
Search for hostnames and IP addresses in large log files
dbhaskar92/LaTeX
Selected LaTeX documents to serve as templates for future reference
dbhaskar92/MAGIC
MAGIC (Markov Affinity-based Graph Imputation of Cells), is a method for imputing missing values restoring structure of large biological datasets.
dbhaskar92/MIOFlow
Trajectory inference for single-cell sequencing data
dbhaskar92/PHATE
PHATE (Potential of Heat-diffusion for Affinity-based Transition Embedding) is a tool for visualizing high dimensional data.
dbhaskar92/RhoGTPase-Paper
dbhaskar92/SAUCIE
SAUCIE (Sparse Autoencoder for Unsupervised Clustering, Imputation, and Embedding) is a deep neural network to process and extract structure from scRNA-seq and CyTOF data, addressing challenges like noise, complexity, sparsity, and batch effects
dbhaskar92/server-utils
Server setup and administration
dbhaskar92/Slick-Game-Framework
Framework for creating LWJGL games using Box2D Physics Engine
dbhaskar92/SummerWork2018
Summer Workshop (GNU/Linux, version control, Python, R, distributed computing)
dbhaskar92/Zebrafish-Pigmentation-TDA
Topological data analysis of Zebrafish skin pigmentation patterns