Pinned Repositories
agotool
proteomics tools for GO-term or UniProt-keyword enrichment
cathsm-server
Backend server for protein structure modelling pipeline (CATH/SWISS-MODEL)
cmapPy
Assorted tools for interacting with .gct, .gctx files and other Connectivity Map (Broad Institute) data/tools
datasciencecoursera
datasharing
The Leek group guide to data sharing
deamidation
Calculate deamidation rates (Asparagine to Aspartic acid and Glutamine to Glutamic acid) of peptides/proteins/RawFiles for LC/MS data.
dotfiles
config files
PandasIntro
Interactive Data Analysis in Python with Pandas using Jupyter Notebook
statistical-analysis-python-tutorial
Statistical Data Analysis in Python
dblyon's Repositories
dblyon/agotool
proteomics tools for GO-term or UniProt-keyword enrichment
dblyon/PandasIntro
Interactive Data Analysis in Python with Pandas using Jupyter Notebook
dblyon/deamidation
Calculate deamidation rates (Asparagine to Aspartic acid and Glutamine to Glutamic acid) of peptides/proteins/RawFiles for LC/MS data.
dblyon/statistical-analysis-python-tutorial
Statistical Data Analysis in Python
dblyon/cathsm-server
Backend server for protein structure modelling pipeline (CATH/SWISS-MODEL)
dblyon/cmapPy
Assorted tools for interacting with .gct, .gctx files and other Connectivity Map (Broad Institute) data/tools
dblyon/datasciencecoursera
dblyon/datasharing
The Leek group guide to data sharing
dblyon/dotfiles
config files
dblyon/fishers_exact_test
Fishers Exact Test for Python (Cython)
dblyon/gunicorn
gunicorn 'Green Unicorn' is a WSGI HTTP Server for UNIX, fast clients and sleepy applications.
dblyon/mod_sites_and_prob
command line script to parse modification sites and their probabilities from MaxQuant evidence.txt, optional setting to filter on probabilities
dblyon/pCLAP_Tryp2LysC
This is a proteomics tool to map tryptic peptides to Lys-C peptides
dblyon/protover
Automated protein turnover calculations from 15N partial metabolic labeling LC/MS shotgun proteomics data.
dblyon/TPP
Statistical analysis of Thermal Proteome Profiling experiments for drug-target detection by multiplexed proteomics