dceoy

成島大智 (Narushima, Daichi)

National Cancer Center JapanTokyo, Japan

Pinned Repositories

docker-bio
Dockerfile repository for Bioinformatics
Language:Dockerfile34 5 713
docker-nginx-autoindex
Dockerfile for Nginx with autoindex
Language:Dockerfile13 3 18
docker-rstudio-server
Dockerfile for RStudio Server
Language:Dockerfile59 3 520
fract
Automated Forex Trader based on oanda-cli
Language:Python7 2 05
gh-actions-for-devops
GitHub Actions reusable workflows for DevOps
Language:Shell00
meddra-sqlite
Database Construction Tool for MedDRA/J
Language:Shell71
oanda-cli
Command Line Interface for Oanda V20 REST API
Language:Python50
pdbio
Pandas-based Data Handler for VCF, BED, and SAM Files
Language:Python32 4 21
sdeul
Structural Data Extractor using LLMs
Language:Python00

dceoy's Repositories

dceoy/pdbio
Pandas-based Data Handler for VCF, BED, and SAM Files
Language:Python32 4 21
dceoy/fract
Automated Forex Trader based on oanda-cli
Language:Python7 2 05
dceoy/oanda-cli
Command Line Interface for Oanda V20 REST API
Language:Python50
dceoy/docker-jekyll
Dockerfile for Jekyll with GitHub Pages
Language:Dockerfile1
dceoy/docker-r-tidyverse
Dockerfile for R with tidyverse
Language:Dockerfile1 2 01
dceoy/macdf
MACD-based Forex Trader using Oanda API
Language:Python1 3 03
dceoy/tifft
Technical Indicators for Financial Trading
Language:Python11
dceoy/tmber
Tumor Mutational Burden Analyzer
Language:Python1 2 0
dceoy/amazon-ecr-bi
Bioinformatic Docker Images for AWS
Language:Dockerfile
dceoy/ansible-bcl2fastq
Ansible playbook to convert bcl into fastq for Illumina NextSeq
Language:Shell1
dceoy/command-template-bash
Tiny and portable bash script as an executable command
Language:Shell
dceoy/docker-apache2-perl-cgi
Dockerfile for Apache2 HTTP server with Perl CGI
Language:Dockerfile
dceoy/docker-flake8
Dockerfile for flake8
Language:Dockerfile
dceoy/docker-hugo
Dockerfile for Hugo
Language:Dockerfile3 0
dceoy/docker-jupyter
Dockerfile for JupyterLab
Language:Dockerfile3 0
dceoy/docker-ot-ui-apps
[Under development] Dockerfile for Open Targets Platform web applications
Language:Dockerfile
dceoy/docker-r-jupyter
Dockerfile for R with Jupyter Notebook
Language:Dockerfile3 01
dceoy/docker-streamlit
Dockerfile for Streamlit
Language:Dockerfile
dceoy/ftarc
FASTQ-to-analysis-ready-CRAM Workflow Executor for Human Genome Sequencing
Language:Python2 0
dceoy/gitlab-ci-to-aws
[Under development] Toolkit for CI/CD from GitLab to AWS
Language:Shell
dceoy/jupyter-time-series-pocs
Kalman Filter and its Tuner
Language:Jupyter Notebook2 0
dceoy/newsroom
A simple, minimalistic Hugo theme. View Demo here
Language:Sass1 0
dceoy/pdrdb
Pandas-based SQL Executor for RDBMS
Language:Python
dceoy/replace-sam-read-group
Command to atomically replace Read-Group tags in a BAM or CRAM file
Language:Shell
dceoy/s3-sync-entrypoint
Bash entrypoint to synchronize data with AWS S3 before and after command execution
Language:Shell
dceoy/sagvc
Somatic and Germline Variant Calling Pipeline
Language:Python
dceoy/streamlit-financial-tsa
[Under development] Streamlit Application for Financial Time-series Analyses
Language:Python
dceoy/vanqc
Variant Annotator and QC Checker for Human Genome Sequencing
Language:Python2 0
dceoy/vcline
[Deprecated] Variant Calling Pipeline for Cancer Genome Sequencing
Language:Python2 0
dceoy/wsl-ssh-forwarder
[Under development] SSH Forwarder for WSL
Language:Shell