/domain_visualizer

Visualizes protein domains locations based on information gathered from Uniprot stored in csv files

Primary LanguageJavaScript

Domain Visualizer

Visualizes the domain information parsed from the "Family and Domains" section from Uniprot built using d3. Has the ability to put a marker to help compare protein locations with domain. This will require pre-scraped information to be loaded into the webpage. The necessary columns needed are the following:

GENENAME - Name of the gene
UniprotID - The uniprot ID
Organism - Organism that the uniprot ID belongs to
Reviewed - If the entry has been reviewed or not
Evidence - The type of evidence used in the review
Features - Feature key
Start - Start position of domain/family
End - End position of domain/family
Descriptions - Description of domain/family