/pyMOU

Light package for connectivity estimation and analysis of neuroimaging data (e.g. fMRI). It relies on the multivariate Ornstein-Uhlenbeck process (MOU).

Primary LanguagePythonApache License 2.0Apache-2.0

pyMOU

Light package for simulation and connectivity estimation using the multivariate Ornstein-Uhlenbeck process (MOU)

This Python library relies on the MOU process to simulate network activity and estimate connectivity from observed activity (Gilson et al. PLoS Comput Biol 2016; https://www.biorxiv.org/content/10.1101/531830v2).

Quick install using pip

The installer pip comes with Anaconda and most Python distribution. Just run:

$ pip install git+https://github.com/mb-BCA/pyMOU.git@master

How to use?

Check the Python notebooks in examples.