JAXline - Experiment framework for JAX
What is JAXline
JAXline is a distributed JAX training and evaluation framework. It is designed to be forked, covering only the most general aspects of experiment boilerplate. This ensures that it can serve as an effective starting point for a wide variety of use cases.
Many users will only need to fork the
experiment.py
file and rely on JAXline for everything else. Other users with more custom
requirements will want to (and are encouraged to) fork other components of
JAXline too, depending on their particular use case.
Contents
- Quickstart
- Checkpointing
- Logging
- Launching
- Distribution strategy
- Random number handling
- Debugging
- Contributing
Quickstart
Installation
JAXline is written in pure Python, but depends on C++ code via JAX and TensorFlow (the latter is used for writing summaries).
Because JAX / TensorFlow installation is different depending on your CUDA
version, JAXline does not list JAX or TensorFlow as a dependencies in
requirements.txt
.
First, follow the instructions to install JAX and TensorFlow respectively with the relevant accelerator support.
Then, install JAXline using pip:
$ pip install git+https://github.com/deepmind/jaxline
Building your own experiment
-
Create an
experiment.py
file and inside it define anExperiment
class that inherits fromexperiment.AbstractExperiment
. -
Implement the methods required by
AbstractExperiment
in your ownExperiment
class (i.e. theabstractmethod
s). Optionally override the default implementations ofAbstractExperiment
's other methods. -
Define a
config
, either inexperiment.py
or elsewhere, defining any settings that you do not wish to inherit frombase_config
. At the very least this will includeconfig.experiment_kwargs
to define the config required by yourExperiment
. Make sure thisconfig
object is included in theflags
accessible toexperiment.py
. -
Add the following lines to the bottom of your
experiment.py
to ensure that yourExperiment
object is correctly passed through toplatform.py
:if __name__ == '__main__': flags.mark_flag_as_required('config') platform.main(Experiment, sys.argv[1:])
-
Run your
experiment.py
.
Checkpointing
So far this version of JAXline only supports in-memory checkpointing, as handled
by our
InMemoryCheckpointer
It allows you to save in memory multiple separate checkpoint series in your
train and eval jobs (see below).
The user is expected to override the
CHECKPOINT_ATTRS
and
NON_BROADCAST_CHECKPOINT_ATTRS
dicts (at least one of these) in order to map checkpointable attributes of their
own Experiment
class to names they wish them to be stored under in the
checkpoint.
CHECKPOINT_ATTRS
specifies jax DeviceArrays
for which jaxline should only
take the first slice (corresponding to device 0) for checkpointing.
NON_BROADCAST_CHECKPOINT_ATTRS
specifies any other picklable object that
jaxline should checkpoint whole.
You can specify the frequency with which to save checkpoints, as well as whether
to checkpoint based on step or seconds, by setting the
save_checkpoint_interval
and interval_type
config flags
here.
config.max_checkpoints_to_keep
can be used to specify the maximum number of
checkpoints to keep. By default this is set to 5.
By setting config.best_model_eval_metric
, you can specify which value in the
scalars
dictionary returned by your
evaluate
function to use as a 'fitness score'. JAXline will then save a separate series
of checkpoints corresponding to steps at which the fitness score is better than
previously seen. Depending on whether you are maximizing or minimizing the eval
metric, set config.best_model_eval_metric_higher_is_better
to True or False.
Logging
So far this version of JAXline only supports logging to Tensorboard via our
TensorBoardLogger
The user is expected to return a dictionary of scalars from their
step
and
evaluate
methods, and
TensorBoardLogger.write_scalars
will periodically write these scalars to TensorBoard
.
All logging will happen asynchronously to the main thread so as not to interrupt the training loop.
You can specify the frequency with which to log, as well as whether to log by
step or by seconds, by setting the log_train_data_interval
and interval_type
config flags here.
If config.log_all_train_data
is set to True
(False
by default) JAXline
will cache the scalars from intermediate steps and log them all at once at the
end of the period.
JAXline passes the
TensorBoardLogger
instance through to the
step
and
evaluate
methods to allow the user to perform additional logging inside their
Experiment
class if they so wish. A particular use case for this is if you
want to write images, which can be achieved via
ExperimentWriter.write_images
.
Launching
So far this version of JAXline does not support launching remotely.
Distribution strategy
JAX makes it super simple to distribute your jobs across multiple hosts and cores. As such, JAXline leaves it up to the user to implement distributed training and evaluation.
Essentially, by decorating a function with
jax.pmap
you tell JAX to slice the inputs along the first dimension and then run the
function in parallel on each input slice, across all available local devices (or
a subset thereof). In other words,
jax.pmap
invokes the single-program multiple-data (SPMD) paradigm. Then by using
jax.lax
collective
communications operations from within your pmapped function, you can tell JAX to
communicate results between all devices on all hosts. For example, you may
want to use jax.lax.psum
to sum up the gradients across all devices on all hosts, and return the result
to each device (an all-reduce).
JAX will then automatically detect which devices are available on each host
allowing
jax.pmap
and jax.lax
to work their
magic.
One very important thing to bear in mind is that each time you call
jax.pmap
,
a separate TPU program will be compiled for the computation it wraps. Therefore
you do not want to be doing this regularly! In particular, for a standard ML
experiment you will want to call
jax.pmap
once to wrap your parameter update function,
and then you call this wrapped function on each step, rather than calling
jax.pmap
on each step, which will kill your performance! This is a very common mistake
for new JAX starters. Luckily it has quite an extreme downside so should be
easily noticeable. In JAXline we actually call
jax.pmap
once more in
next_device_state
to wrap our function to update device state between steps, so end up with 2 TPU
programs rather than just 1 (but this adds negligible overhead).
Random number handling
Random numbers in JAX might seem a bit unfamiliar to users coming from ordinary
numpy
and Tensorflow
. In these languages we have global stateful PRNGs.
Every time you call a random op it updates the PRNGs global state. However,
stateful PRNGs in JAX would be incompatible with JAX's functional design
semantics, leading to problems with reproducibility and parallelizability. JAX
introduces stateless PRNGs to avoid these issues. The downside of this is that
the user needs to thread random state through their program, splitting a new
PRNG off from the old one every time they want to draw a new random number. This
can be quite onerous, especially in a distributed setting, where you may have
independent PRNGs on each device.
In JAXline we take care of this for you. On each step, in
next_device_state
,
we split a new PRNG from the old one, and optionally specialize it to the host
and/or device based on the
random_mode_train
config
value you specify. We then pass this new PRNG through to your
step
function to use on that particular step. At evaluation time, we pass a fresh
PRNG to your
evaluate
method, initialized according to the random_mode_eval
config value
you specify. This PRNG will be the same on each call to
evaluate
(as normally you want your evaluation to be deterministic). If you want
different random behaviour on each call, a simple solution would be to fold in
the global_step
i.e. jax.random.fold_in(rng, global_step)
at the top of your
evaluate
method.
Of course you are free to completely ignore the PRNGs we pass through to your
step
and
evaluate
methods and handle random numbers in your own way, should you have different
requirements.
Debugging
Post mortem debugging
By setting the flag --jaxline_post_mortem
(defined
here) on the command-line,
tasks will pause on exceptions (except SystemExit
and KeyboardInterrupt
) and
enter post-mortem debugging using pdb. Paused tasks will hang until you attach
a debugger.
Disabling pmap and jit
By setting the flag --jaxline_disable_pmap_jit
on the command-line, all pmaps
and jits will be disabled, making it easier to inspect and trace code in a
debugger.
Citing Jaxline
Please use this reference.
Contributing
Thank you for your interest in JAXline. The primary goal of open-sourcing JAXline was to allow us to open-source our research more easily. Unfortunately, we are not currently able to accept pull requests from external contributors, though we hope to do so in future. Please feel free to open GitHub issues.