delt0r/msms

Time sampled data 2

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lormond commented

Command line:
msms 60 10000 -N 10000 -t 40 -SI tbs 1 0.0001 -Sp 0.500 -Smark -SFC -SAA tbs -SAa tbs -IT 3 1 0 20 0.02 20 0.04 20

from uniform priors for s and Ts
Ts=runif(nreps,0,0.05)
s=runif(nreps,0,0.1)

Error report that arises sometimes but not others:
Exception in thread "main" java.lang.NullPointerException
at at.mabs.coalescent.CoalescentEventCalculator.nextCoalescentSelection(CoalescentEventCalculator.java:349)
at at.mabs.coalescent.CoalescentEventCalculator.nextEventSelection(CoalescentEventCalculator.java:90)
at at.mabs.coalescent.CoalescentEventCalculator.calculateCoalescentHistory(CoalescentEventCalculator.java:520)
at at.MSLike.run(MSLike.java:301)
at at.MSLike.runThreads(MSLike.java:424)
at at.MSLike.runMe(MSLike.java:191)
at at.MSLike.main(MSLike.java:543)
at at.MSLike.main(MSLike.java:587)