/rna-seq_master_script_primers

Primers for creating master shell scripts commonly associated with RNA-seq tools and their analysis of NGS data.

master_script_primers

A quick and dirty guide for those working with next-gen sequencing (NGS) data and would like to create master shell scripts to automate various jobs in a server cluster. These primers assume that you have some prior knowledge of bash and server cluster commands, various file formats and tools associated with NGS.

By no means are any of these scripts optimized and complete, they have simply been written to fulfill their job and are hopefully easy enough to understand given the typical experiment set-up and subsequent analysis.