denis-torre's Stars
ctlab/fgsea
Fast Gene Set Enrichment Analysis
applied-bioinformatics/An-Introduction-To-Applied-Bioinformatics
Interactive lessons in bioinformatics.
Teichlab/cellphonedb
jminnier/STARTapp
The START App: R Shiny Transcriptome Analysis Resource Tool
anders-biostat/sleepwalk
Exploring dimension-reduced embeddings
PoisonAlien/maftools
Summarize, Analyze and Visualize MAF files from TCGA or in-house studies.
scRNA-tools/scRNA-tools
Table of software for the analysis of single-cell RNA-seq data.
gto76/python-cheatsheet
Comprehensive Python Cheatsheet
kleampa/not-paid
Client did not pay? Add opacity to the body tag and decrease it every day until their site completely fades away
pomber/git-history
Quickly browse the history of a file from any git repository
biolink/ontobio
python library for working with ontologies and ontology associations
sbl-sdsc/mmtf-workshop-2018
Structural Bioinformatics Training Workshop & Hackathon 2018
RGLab/MAST
Tools and methods for analysis of single cell assay data in R
aertslab/SCENIC
SCENIC is an R package to infer Gene Regulatory Networks and cell types from single-cell RNA-seq data.
ropensci/biomartr
Genomic Data Retrieval with R
jdidion/atropos
An NGS read trimming tool that is specific, sensitive, and speedy. (production)
sunbeam-labs/sunbeam
A robust, extensible metagenomics pipeline
metagenome-atlas/atlas
ATLAS - Three commands to start analyzing your metagenome data
tidyomics/plyranges
A grammar of genomic data transformation
IndrajeetPatil/ggstatsplot
Enhancing {ggplot2} plots with statistical analysis 📊📣
jupyter/jupyter
Jupyter metapackage for installation, docs and chat
jupyter/nbformat
Reference implementation of the Jupyter Notebook format