Pinned Repositories
abacus
ballgown2deseq
Python script that takes a folder of ballgown files and reformats them for DESeq2
bebeCakes
A bunch of custom R functions you use a lot
CNVfinder
cytoscape-app-samples
Cytoscape 3 sample code for App developers.
gencodeSNPfinder
luciphor-mstoolkit
luciphor-pwiz
lucXor
JAVA-based implementation of LuciPHOr that can process any variable PTM.
makeDecoyFasta
JAVA program to generate decoy protein sequences
dfermin's Repositories
dfermin/lucXor
JAVA-based implementation of LuciPHOr that can process any variable PTM.
dfermin/abacus
dfermin/ballgown2deseq
Python script that takes a folder of ballgown files and reformats them for DESeq2
dfermin/bebeCakes
A bunch of custom R functions you use a lot
dfermin/CNVfinder
dfermin/cytoscape-app-samples
Cytoscape 3 sample code for App developers.
dfermin/gencodeSNPfinder
dfermin/luciphor-mstoolkit
dfermin/luciphor-pwiz
dfermin/makeDecoyFasta
JAVA program to generate decoy protein sequences
dfermin/peer
A factor analysis package
dfermin/Rcode
dfermin/repopRef
Tool to "backfill" reference calls in a group of VCF files where they have been dropped.
dfermin/ShinyCell
Shiny Interactive Web Apps for Single-Cell Data
dfermin/tacoBuddy
Project to parse VCF files and filter the variants that are reported in them.
dfermin/tmux-NvimR
Clone of jalvesaq/Nvim-R that works with Tmux 2.7