- seq2sam: convert single-end or paired-end reads into sam format
- 10x_trim: trim 10x data
- eutls: some algorithms, now has KMP alg
make
Usage: seq2sam [options] -1 <FASTA/Q>
Options:
-o STR output file [stdout]
-1 STR read1 file
-2 STR read2 file
-r STR read group header line such as '@RG\tID:foo\tSM:bar'
-h help