/disgenet

Processing the DisGeNET database of disease–gene association

Primary LanguageJupyter Notebook

Extracting disease–gene associations from DisGeNET

DisGeNET is a resource that integrates disease–gene associations from several sources [ref]. We're using the resource in Rephetio, our network for drug repurposing. This repository extracts associations for the diseases and genes in rephetio.

disgenet.ipynb processes the DisGeNET downloads and outputs user-friendly TSVs to data.

License

DisGeNET content and derivatives are licensed under the ODbL 1.0. All original content is licensed under CC0 1.0.